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Showing 8 of 17 simulations

Human hemoglobin in the oxygen-bound R state. The classic structure that captures cooperative binding mid-cycle.

JTJin Tanaka

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Closed-trimer prefusion conformation of the spike glycoprotein. The starting state for receptor-binding-domain opening dynamics.

SVSofia Vargas

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The first protein structure ever solved by X-ray crystallography (Kendrew, 1958). Still a benchmark for oxygen-storage dynamics.

HNHenrik Nilsson

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Human deoxyhemoglobin in the tense T state. Pairs naturally with 1HHO to study the allosteric switch behind cooperative oxygen binding.

PIPriya Iyer

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A 46-residue plant protein resolved at sub-ångström resolution. A tiny but exceptionally well-resolved benchmark for force fields.

DCDaniel Cohen

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147 base pairs of DNA wrapped around a histone octamer (two copies of H2A, H2B, H3, H4). The fundamental unit of chromatin.

ERElena Rossi

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Small, exceptionally stable Kunitz-domain inhibitor of serine proteases — one of the most thoroughly studied proteins in biophysics.

LBLukas Becker

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Seventy-six residues of fold-and-signaling perfection. The reference β-grasp fold and a staple of folding studies.

LBLukas Becker

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